AFP Cases

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Variable Variable name in the data entry Description Data type Variable options Variable name in the exports
Allowed Values Required Afpcases.Csv Export Afp Cases And Specimens To Csv Export Afp Cases To Csv Poliolab.Csv
SPECFROM SPECFROM - Specimen source N/A number 1 = AFP case Yes Casecontact case.FIELD_CA_SPECFROM case.FIELD_CA_SPECFROM CaseOrContact
2 = Contact
6 = Excluded AFP
9 = Healthy Children
NOMADIC_TYPE NOMADIC_TYPE - Type of nomadic N/A number 1 = Stool Survey N/A N/A case.FIELD_NOMADIC_TYPE case.FIELD_NOMADIC_TYPE N/A
2 = Nomadic Child
URGCASE URGCASE - Hot Case? N/A number 1 = Yes N/A N/A case.FIELD_URGENT case.FIELD_URGENT N/A
2 = No
AREA_CCODE AREA - Area (COUNTRY) N/A text N/A N/A Countrycode case.CCODE case.CCODE N/A
AREA_COUNTRY AREA - Area (COUNTRY) N/A text N/A N/A N/A case.ADMIN0 case.ADMIN0 N/A
AREA_STATE_CODE AREA - Area (STATE) N/A text N/A N/A N/A case.STATE_CODE case.STATE_CODE N/A
AREA_STATE AREA - Area (STATE) N/A text N/A N/A N/A case.ADMIN1 case.ADMIN1 N/A
AREA_COUNTY_CODE AREA - Area (COUNTY) N/A text N/A N/A N/A case.COUNTY_CODE case.COUNTY_CODE N/A
AREA_COUNTY AREA - Area (COUNTY) N/A text N/A N/A N/A case.ADMIN2 case.ADMIN2 N/A
EPID EPID N/A text N/A Yes EpidNumber case.EPID case.EPID EpidNumber
CASENUMBER CASENUMBER - Case number N/A text N/A Yes CaseNumber case.FIELD_SERIALD case.FIELD_SERIALD N/A
DONSET DONSET - Date of paralysis onset N/A datetime N/A N/A DateOfOnset case.FIELD_DONSET case.FIELD_DONSET DateOfOnset
CID CID - Contact Number for EPID N/A text N/A N/A N/A case.FIELD_CONTACT_NUMBER case.FIELD_CONTACT_NUMBER N/A
NAME NAME - Name of patient N/A text N/A Yes NamesOfPatient case.FIELD_NAME case.FIELD_NAME N/A
SEX SEX - Sex N/A number 1 = Male Yes Sex case.FIELD_SEX case.FIELD_SEX N/A
2 = Female
PARENTS PARENTS - Father/Mother N/A text N/A N/A Fathermother case.FIELD_AFRO_PARENTS case.FIELD_AFRO_PARENTS N/A
AGEY AGEY - Age - Years N/A number N/A Yes AgeInYears case.FIELD_AFRO_AGE_YEARS case.FIELD_AFRO_AGE_YEARS N/A
AGEM AGEM - Age - Months N/A number N/A Yes AgeInMonths case.FIELD_AGE case.FIELD_AGE N/A
DBIRTH DBIRTH - Date of Birth N/A datetime N/A N/A DateOfBirth case.FIELD_AFRO_DOB case.FIELD_AFRO_DOB N/A
NEARESTHF NEARESTHF - Nearest health facility to village N/A text N/A N/A NearestHealthfacility case.FIELD_AFRO_NEAREST_HEALTH_FAC case.FIELD_AFRO_NEAREST_HEALTH_FAC N/A
ADDRESS ADDRESS - Address N/A text N/A N/A Address case.FIELD_ADDRESS case.FIELD_ADDRESS N/A
VILLNEIGH VILLNEIGH - Village / Neighbourood N/A text N/A N/A Villageneighbourhood case.FIELD_AFRO_VILLAGE_NEIGHBOUROOD case.FIELD_AFRO_VILLAGE_NEIGHBOUROOD N/A
TOWN TOWN - Town / City N/A text N/A N/A Towncity case.FIELD_AFRO_TOWN_CITY case.FIELD_AFRO_TOWN_CITY N/A
GEOLOC_LAT GEOLOC - Geolocation Stores the latitude value number N/A N/A Latitude case.FIELD_GEOLOCATION_LAT case.FIELD_GEOLOCATION_LAT N/A
GEOLOC_LNG GEOLOC - Geolocation Stores the longitude value number N/A N/A Longitude case.FIELD_GEOLOCATION_LNG case.FIELD_GEOLOCATION_LNG N/A
NOTIFIER NOTIFIER - Notified by N/A text N/A N/A NotifiedBy case.FIELD_AFRO_NOTIFIER case.FIELD_AFRO_NOTIFIER N/A
DNOT DNOT - Date of notification N/A datetime N/A N/A DateNotified case.FIELD_DNOT case.FIELD_DNOT N/A
DOI DOI - Date of investigation N/A datetime N/A N/A DateCaseinvestigated case.FIELD_DOI case.FIELD_DOI N/A
DSTCOLLCONT DSTCOLLCONT - Date Contact Stool Collected N/A datetime N/A N/A DateContactStoolCollected case.FIELD_AFRO_DATE_CONTACT_STOOL case.FIELD_AFRO_DATE_CONTACT_STOOL N/A
REASCOLLCONT REASCOLLCONT - Reason For Contact Stool N/A text 1 = Inadequate index AFP case N/A ReasonForConactStool case.FIELD_AFRO_REASON_CONTACT_STOOL case.FIELD_AFRO_REASON_CONTACT_STOOL N/A
2 = Index AFP Hot case
3 = Hard-to-reach area
9 = Other
RELINDEX RELINDEX - Relation To Index N/A text 1 = Household relative N/A RelationToIndex case.FIELD_AFRO_RELATION_TO_INDEX case.FIELD_AFRO_RELATION_TO_INDEX N/A
2 = Household non-relative
3 = Out of household relative
4 = Neighbour
5 = Playmate/Schoolmate
9 = Other
PEXPOSURE PEXPOSURE - Period Of Exposure N/A text 1 = Within 7 days to onset N/A PeriodOfExposure case.FIELD_AFRO_PERIOD_EXPOSURE case.FIELD_AFRO_PERIOD_EXPOSURE N/A
2 = Within 2 weeks after onset
HOSPITALISED HOSPITALISED - Hospitalised? N/A number 1 = Yes N/A AdmittedTohospital case.FIELD_AFRO_HOSPITALISED case.FIELD_AFRO_HOSPITALISED N/A
2 = No
DHOSPITALISED DHOSPITALISED - Date of admission to hospital N/A datetime N/A N/A DateOfAdmission case.FIELD_AFRO_DADMISSIONHOSPITAL case.FIELD_AFRO_DADMISSIONHOSPITAL N/A
FEVER FEVER - Fever at onset of weakness/paralysis N/A number 1 = Yes N/A FeverAtOnset case.FIELD_FEVER case.FIELD_FEVER N/A
2 = No
9 = Unknown
PARAPROG PARAPROG - Progressive Paralysis (within 3 days) N/A number 1 = Yes N/A Progressionin3days case.FIELD_AFRO_PROGRESS3D case.FIELD_AFRO_PROGRESS3D N/A
2 = No
9 = Unknown
FLACCID FLACCID - Is this case a Flaccid (Floppy) weakness/paralysis N/A number 1 = Yes N/A Flaccidsuddenparalysis case.FIELD_AFRO_FLACCID case.FIELD_AFRO_FLACCID N/A
2 = No
9 = Unknown
ASYM ASYM - Asymmetric weakness/paralysis N/A number 1 = Yes N/A Asymmetrical case.FIELD_ASYM case.FIELD_ASYM N/A
2 = No
9 = Unknown
RLEG RLEG - Right leg N/A number 1 = Yes N/A Rl case.FIELD_AFRO_RLEG case.FIELD_AFRO_RLEG N/A
2 = No
LLEG LLEG - Left leg N/A number 1 = Yes N/A Ll case.FIELD_AFRO_LLEG case.FIELD_AFRO_LLEG N/A
2 = No
RARM RARM - Right arm N/A number 1 = Yes N/A Ra case.FIELD_AFRO_RARM case.FIELD_AFRO_RARM N/A
2 = No
LARM LARM - Left arm N/A number 1 = Yes N/A La case.FIELD_AFRO_LARM case.FIELD_AFRO_LARM N/A
2 = No
SENSITIVEPAIN SENSITIVEPAIN - Paralysed limb(s) sensitive to pain N/A number 1 = Yes N/A Sensitivetopain case.FIELD_AFRO_SENSITIVE_TO_PAIN case.FIELD_AFRO_SENSITIVE_TO_PAIN N/A
2 = No
INJECTION INJECTION - Was there any injection just before onset of paralysis N/A number 1 = Yes N/A InjectionbeforeOnset case.FIELD_AFRO_INJECTION case.FIELD_AFRO_INJECTION N/A
2 = No
INJECTIONL INJECTIONL - Left injection site N/A number 1 = Arm N/A Injectionleftsite case.FIELD_AFRO_INJECTIONL case.FIELD_AFRO_INJECTIONL N/A
2 = Forearm
3 = Buttock
4 = Thigh
5 = Leg
INJECTIONR INJECTIONR - Right injection site N/A number 1 = Arm N/A Injectiongivenrightsite case.FIELD_AFRO_INJECTIONR case.FIELD_AFRO_INJECTIONR N/A
2 = Forearm
3 = Buttock
4 = Thigh
5 = Leg
PDIAG PDIAG - Provisional diagnosis N/A text 98 = Unknown N/A N/A case.FIELD_AFRO_PDIAG case.FIELD_AFRO_PDIAG N/A
99 = Other
A01 = Typhoid and paratyphoid fevers
A09 = Diarrhoea and gastroenteritis of presumed infectious origin
A17+ = Tuberculosis of nervous system, cerebral, spinal, meninges
A18.0 = Tuberculosis of bones and joints, spine (Pott's)
A19 = Miliary tuberculosis
A36 = Diphtheria
A41 = Septicaemia, Septic shock, Sepsis
A80 = Acute Poliomyelitis
A80.0 = Acute Paralytic poliomyelitis, vaccine-associated
A80.1 = Acute Paralytic poliomyelitis, Wild virus, Imported
A80.2 = Acute Paralytic poliomyelitis, Wild virus, Indignous
A80.3 = Acute Paralytic poliomyelitis, Wild virus, Imported,other and Unspecified
A80.4 = Acute non-Paralytic poliomyelitis
A80.9 = Acute Poliomyelitis, Unspecified
A85 = Enteroviral encephalitis, encephalomyelitis
B01 = Varicella [chickenpox]
B05 = Measles, Measles complicated by encephalitis, meningitis
B34 = Viral infection, Viraemia
B34.1 = Non-polio enteromyelitis
B54 = Malaria, Malaria complicated with cerebral complications
C47 = Malignant neoplasm of peripheral nerves, sympathetic and parasympathetic nerves and ganglia, Neuroblastoma
C71 = Malignant neoplasm of brain,brain stem,Pons Tumour, Astrocytoma, Ependymoma, Dermoid
C72 = Malignant neoplasm of spinal cord, cranial nerves and other parts of central nervous system
C95 = Leukaemia
D43 = Neoplasm of central nervous system, Brain, Spinal cord, Central nervous system, Brain stem, Cerebellum
D57 = Sickle-cell anaemia, Sickle-cell disorders
D64 = Anaemias, Anaemia, unspecified
D69.0 = Allergic purpura, Henoch-Schnlein, vascular, diopathic, haemorrhagic
E41 = Nutritional marasmus
E46 = Malnutrition, protein-energy malnutrition
E55 = Rickets, Vitamin D deficiency
E87 = Disorders of fluid, electrolyte and acid-base balance
E87.6 = Hypokalaemia, Hypokalemic hypotonia
E88 = Metabolic disorders
F45 = Psychosomatic disorder, Hysterical
F79 = Mental retardation, Delayed milestones
G00 = Bacterial meningitis
G03 = Meningitis, Meningitis due to unspecified causes, Arachnoiditis, Nonpyogenic meningitis
G04 = Encephalitis, myelitis, encephalomyelitis, Acute disseminated encephalitis, meningoencephalitis, meningomyelitis
G06 = Brain Abscess, Spinal abscess, Intracranial and intraspinal abscess and granuloma, epidural, extradural, subdural
G12 = Spinal muscular atrophy, Infantile spinal muscular atrophy, type I [Werdnig-Hoffman]
G31 = Brain atrophy, Degenerative diseases of nervous system
G37.3 = Transverse myelitis
G40 = Epilepsy, convulsions, seizures, epileptic fits, fits, postictal state
G45 = Transient cerebral ischaemic attacks and related syndromes
G51.0 = Bell's palsy, Facial palsy
G55* = Nerve root and plexus compressions in diseases classified elsewhere
G56 = Lesion of radial or ulnar nerves. Mononeuropathies of upper limb
G61 = Inflammatory polyneuropathy, Polyradiculoneuropathies, Cytomegaloviral, Acute motor axonal, Post infective polyneuritis
G61.0 = Guillain Barre syndrome
G70 = Myasthenia gravis and other myoneural disorders (Congenital, developmental, Toxic, drug induced)
G71 = Disorders of muscle, Muscular dystrophy, Myotonic disorders, Myotonia, Duchenne muscular dystrophy
G80 = Cerebral palsy
G81 = Hemiplegia, Childhood hemiplegia, hemiparesis
G82 = Paraplegia and tetraplegia
G83 = Monoplegia, Diplegia, Cauda equina syndrome
G83.8 = Todd's paralysis (postepileptic)
G93 = CVA, Disorder of brain, brain lesion unspecified, Upper motor neuron lesion
G95 = Diseases of spinal cord (Myelopathy), Drug induced, vascular, cord compression, Syringomyelia and syringobulbia
I00 = Rheumatic fever, rheumatic artheritis, acute or subacute
I02 = Rheumatic chorea
I61 = Intracerebral haemorrhage, cerebral, brain stem, cerebellum, intraventricular
I63 = Cerebral infarction, thrombosis, embolism, occlusion or stenosis
I64 = Stroke, not specified as haemorrhage or infarction
I67 = Cerebrovascular disease, Aneurysm, ischaemia, atherosclerosis, unspecified
J06 = Acute upper respiratory infections of multiple and unspecified sites
J18 = Pneumonia
L03 = Cellulitis
L08.9 = Abscess, Local infection of skin and subcutaneous tissue
M00 = Pyogenic arthritis
M06 = Rheumatoid arthritis
M08 = Juvenile arthritis
M12.8 = Transient arthropathy
M13 = Arthritis
M21 = Deformities of limbs, wrist or foot drop
M25 = Joint disorders, Effusion of joint, Pain in joint, Stiffness of joint
M49* = Spondylopathies,Tuberculosis of spine, Pott's curvature
M60 = Myositis, Polymyositis, neoplasma, autoimmune diseases, viral myositis, Trichinosis
M62 = Disorder of muscle, weakness, wasting, atrophy, strain, Ischaemic infarction
M65 = Synovitis and tenosynovitis
M79.1 = Myalgia
M85 = Disorders of bone density and structure, Cyst of bone, Osteosclerosis, Hyperostosis, Dysplasia
M86 = Osteomyelitis
P14 = Erb's paralysis, Klumpke's paralysis, Birth injury to peripheral nervous system and brachial plexus
P94 = Floppy baby syndrome, Disorders of muscle tone of newborn, neonatal myasthenia gravis, Congenital hypotonia
Q66.0 = Talipes equinovarus
Q89 = Congenital malformations
R26 = Abnormalities of gait and mobility, Staggering gait, Ataxic gait, Difficulty in walking, Unsteadiness on feet
R27.0 = Ataxia, Cerebellar
R53 = Malaise and fatigue, Debility, General physical deterioration, Tiredness
R56 = Febrile convulsions, unspecified convulsions, Seizure, Fit
S06 = Intracranial injury, Concussion, Traumatic cerebral oedema, Traumatic compression, Brain injury
S73 = Dislocation, sprain and strain of joint and ligaments of hip
T09.3 = Injury of spinal cord, level unspecified
T09.4 = Injury of unspecified nerve, spinal nerve root and plexus of trunk
T13 = Iinjuries of lower limb, Dislocation, sprain and strain
T14.3 = Dislocation, sprain and strain of unspecified body region
T14.9 = Injury, unspecified
T50 = Poisoning, overdose, intoxication, drugs, medicaments and biological substances
T80 = Traumatic neuritis, Intramuscular gluteal injection, infection, sepsis, abscess, Complications following therapeutic injection
W19 = Unspecified fall
OTHPDIAG OTHPDIAG - If PDIAG=Other - specify diagnosis N/A text N/A N/A Provisionaldiagnosis case.FIELD_AFRO_OTHPDIAG case.FIELD_AFRO_OTHPDIAG N/A
TRUEAFP TRUEAFP - was this a true AFP? N/A number 1 = Yes N/A AfterInvestigationTrueAFP case.FIELD_AFRO_TRUE_AFP case.FIELD_AFRO_TRUE_AFP N/A
2 = No
DLOPV DLOPV - if > 4 doses - date last dose DONSET if Index. DSTCOLL if Contact datetime N/A N/A If4DateOflast case.FIELD_DLOPV case.FIELD_DLOPV N/A
DOSESROUTINE DOSESROUTINE - Total polio vaccine doses: routine (exclude dose at birth) N/A number N/A N/A TotalPoliodoses case.FIELD_AFRO_DOSES_ROUTINE case.FIELD_AFRO_DOSES_ROUTINE N/A
DOPVBIRTH DOPVBIRTH - OPV Dose at birth N/A datetime N/A N/A DateDoseatBirth case.FIELD_AFRO_DOPV_AT_BIRTH case.FIELD_AFRO_DOPV_AT_BIRTH N/A
DOPV1 DOPV1 - 1st OPV N/A datetime N/A N/A DateOf1stDose case.FIELD_AFRO_DOPV1 case.FIELD_AFRO_DOPV1 N/A
DOPV2 DOPV2 - 2nd OPV N/A datetime N/A N/A DateOf2ndDose case.FIELD_AFRO_DOPV2 case.FIELD_AFRO_DOPV2 N/A
DOPV3 DOPV3 - 3rd OPV N/A datetime N/A N/A DateOf3rdDose case.FIELD_AFRO_DOPV3 case.FIELD_AFRO_DOPV3 N/A
DOPV4 DOPV4 - 4th OPV N/A datetime N/A N/A DateOf4thDose case.FIELD_AFRO_DOPV4 case.FIELD_AFRO_DOPV4 N/A
OPVDOSESRI OPVDOSESRI - OPV doses RI N/A number N/A N/A TotalbOPVmOPVdosesRI case.FIELD_AFRO_OPV_DOSES_RI case.FIELD_AFRO_OPV_DOSES_RI N/A
OPVDSIA OPVDSIA - OPV doses SIA N/A number N/A N/A TotalbOPVmOPVdosesSIA case.FIELD_AFRO_OPV_DOSES_SIA case.FIELD_AFRO_OPV_DOSES_SIA N/A
IPVDOSESRI IPVDOSESRI - IPV doses RI N/A number N/A N/A TotalIPVdosesRI case.FIELD_AFRO_IPV_DOSES_RI case.FIELD_AFRO_IPV_DOSES_RI N/A
IPVDOSESSIA IPVDOSESSIA - IPV doses SIA N/A number N/A N/A TotalIPVdosesSIA case.FIELD_AFRO_IPV_DOSES_SIA case.FIELD_AFRO_IPV_DOSES_SIA N/A
DLIPVDOSE DLIPVDOSE - Date of last IPV dose N/A datetime N/A N/A DatelastIPVdoseSIA case.FIELD_AFRO_DLAST_IPV_DOSE case.FIELD_AFRO_DLAST_IPV_DOSE N/A
DFUP DFUP - Date of follow-up N/A datetime N/A N/A DateFollowupExamine case.FIELD_AFRO_DFUP case.FIELD_AFRO_DFUP N/A
RESPARALYSIS RESPARALYSIS - residual paralysis N/A number 1 = Left Arm N/A N/A case.FIELD_AFRO_RESIDUAL_PARAL case.FIELD_AFRO_RESIDUAL_PARAL N/A
2 = Right Arm
3 = Left Leg
4 = Right Leg
FUP FUP - Findings at follow-up N/A number 1 = Residual Flaccid Paralysis N/A FindingsAtFollowup case.FIELD_AFRO_FUP case.FIELD_AFRO_FUP N/A
2 = No residual Paralysis
3 = Lost to follow-Up
4 = Died before follow-Up
5 = Residual Spastic Paralysis
PLACE1 PLACE1 - Place-1 N/A text N/A N/A Place1 case.FIELD_AFRO_PLACE1 case.FIELD_AFRO_PLACE1 N/A
DURMONTH1 DURMONTH1 - Duration in months - 1 N/A number N/A N/A Durationinmonths case.FIELD_AFRO_DURMONTH1 case.FIELD_AFRO_DURMONTH1 N/A
DURDAY1 DURDAY1 - Duration in days - 1 N/A number N/A N/A Durationindays case.FIELD_AFRO_DURDAY1 case.FIELD_AFRO_DURDAY1 N/A
PLACE2 PLACE2 - Place-2 N/A text N/A N/A Place2 case.FIELD_AFRO_PLACE2 case.FIELD_AFRO_PLACE2 N/A
DURMONTH2 DURMONTH2 - Duration in months - 2 N/A number N/A N/A Durationinmonths2 case.FIELD_AFRO_DURMONTH2 case.FIELD_AFRO_DURMONTH2 N/A
DURDAY2 DURDAY2 - Duration in days - 2 N/A number N/A N/A Durationindays2 case.FIELD_AFRO_DURDAY2 case.FIELD_AFRO_DURDAY2 N/A
IMMUNCOMPSTSSUSP IMMUNCOMPSTSSUSP - Immunocompromised status suspected N/A number 1 = Yes N/A Immunocompromised case.FIELD_AFRO_IMMUNCOMPSTSSUSP case.FIELD_AFRO_IMMUNCOMPSTSSUSP N/A
2 = No
9 = Unknown
FCLASS FCLASS - Final classification of the case N/A number 1 = CONFIRMED N/A FinalClassification case.FIELD_AFRO_CLASS_MANUAL case.FIELD_AFRO_CLASS_MANUAL N/A
2 = COMPATIBLE
3 = DISCARDED
4 = iVDPV
5 = cVDPV
6 = aVDPV
7 = VDPV
8 = Not an AFP Case
VDPVSEROTYPE VDPVSEROTYPE - If VDPV Serotype N/A number 1 = 1 N/A VDPVserotype case.FIELD_AFRO_VDPVSEROTYPE case.FIELD_AFRO_VDPVSEROTYPE N/A
2 = 2
3 = 3
FCASERES FCASERES - Final Case Result N/A text N/A N/A N/A case.FIELD_AFR_CA_FCASERES case.FIELD_AFR_CA_FCASERES N/A
CREATEDBYLAB CREATEDBYLAB - Created by Lab N/A boolean 0 = No N/A N/A case.FIELD_CREATED_BY_LAB case.FIELD_CREATED_BY_LAB N/A
1 = Yes